Changelog

Changelog#

All notable changes to this project will be documented in this file.

The format is based on Keep a Changelog, and this project adheres to Semantic Versioning.

Unreleased#

[0.2.3] - 2026-04-13#

Changed#

  • Pinned fastmcp to 3.2.3

  • Use on_duplicate="error" with the pinned FastMCP API

0.2.2 - 2025-10-23#

Changed#

  • Refactored documentation structure and content

0.2.0 - 2025-10-20#

Added#

  • get_embedding_layers: New tool to list available layers for embedding extraction from Evo2 checkpoints

  • Support for layer discovery and selection guidance for downstream tasks

0.1.0 - 2025-10-19#

Added#

  • Initial release of evo2-mcp

  • MCP server implementation for Evo2 genomic sequence operations

  • Tools for sequence generation, scoring, and embedding

  • generate_sequence: Generate genomic sequences using Evo2

  • score_sequence: Score genomic sequences

  • embed_sequence: Generate embeddings for genomic sequences

  • score_snp: SNP variant effect prediction

  • Dummy implementation for testing without GPU/model requirements

  • Support for Python 3.12 and 3.13

  • Test suite with pytest